Documentation

Command line version

PROGRAM : DE FINETTI-DIAGRAM and HARDY-WEINBERG TEST v: 3.0.5 * 2008 JAN 15

Programm call :

finetti [{input file}] [-option1] [-option2]

first non-option commandline parameter is the input file
name; if not given, input of genotype counts is by dialog

Input file : {filename} is an ASCII text file with

  1. comment lines (starting with '*')
  2. a single plot title line
  3. sample data lines, each holding an optional symbol type
    spec ('{1..9}:'), three integer values for the genotype
    counts in the sample, and an optional sample comment string
    Limited to 98 samples.
Example file:
 *
 * Here you can place some comments and descriptions 
 * start every line with a '*'
 * 
 *
 *
 *     
 
 This is the title, which will occure on the top of the graph

 1:  273  100  43   Controls
 2:   40   45  28   Cases
 

Note:The file extension has to be *.txt in the online version

Here you can download an example of an input file

OPTIONS

Option switch is '-' or '/'; options are not case-sensitive


N.B.: output files will overwrite existing files without prior warning ! Note: an browser with svg plugin is needed to show results. Best printing results you will got with Internet Explorer !

Output

If you run the programm in normal svg mode you will got the following output file structure inside a folder which has the name of the title you choosen:

If option z is set you will got the following files:

Modifying the styles

You can easily change the appearance of generated graphics by modifying the "svg.css" file in the css subfolder. Here a short explanation of the classes and the effect of modifying them!
svg.css
Please have a look at selfsvg to get more information about modifying your generated diagrams

Windows

Hint: Don't start the programm by double clicking the finetti.exe.

Open the dos command line shell and change to directory where you stored "finetti.exe". Then start the programm

Linux

If you entering genotype counts by dialog, the programm creates a folder called "finetti_out" to avoid naming conflicts with the executable file.

To use our online de finetti diagram generator you must have javascript enabled!